on 05-15-201208:54 AM - edited on 10-15-202111:40 AM by AnalyteGuru
Mohtashemi I, Fritzemeier K, Grensemann H, Delanghe B, Horn D, Ueckert T. ASMS 2012 Poster Purpose: Here we present the Thermo Scientific Proteome Discoverer software, a node-based framework for proteomics data processing. We will explain the general structure of the software and provide multiple examples of creation of nodes for use in this system.
Methods: All data were acquired on a hybrid ion trap-OrbitrapTM mass spectrometer system equipped with electron transfer dissociation (ETD). New nodes were developed in C# using Visual Studio 2010 and their utility were demonstrated by incorporating them into Proteome DiscovererTM workflows. Results: Development, deployment and analysis of various node implementations are discussed.