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Rapid Proteomics Analysis Algorithm Development Using Proteome Discoverer: A Development Environment for Proteomics Scientists

Reputable Mentor II
Reputable Mentor II
Mohtashemi I, Fritzemeier K, Grensemann H, Delanghe B, Horn D, Ueckert T.
ASMS 2012 Poster
Purpose: Here we present the Thermo Scientific Proteome Discoverer software, a node-based framework for proteomics data processing. We will explain the general structure of the software and provide multiple examples of creation of nodes for use in this system. Methods: All data were acquired on a hybrid ion trap-OrbitrapTM mass spectrometer system equipped with electron transfer dissociation (ETD). New nodes were developed in C# using Visual Studio 2010 and their utility were demonstrated by incorporating them into Proteome DiscovererTM workflows. Results: Development, deployment and analysis of various node implementations are discussed.

Thermo Fisher Scientific
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‎10-15-2021 11:40 AM
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