β07-28-2021 03:41 PM
Are you aware of early single cell proteomics publications before 2017, that is done on potentially large single cells, like xenopus oocytes? Looking to find & share the pioneering research that was likely not identified as "single cell proteomics or single cell protein analysis" that preceded the groundbreaking revolution in single cell sensitivity available today.
Solved! Go to Solution.
β08-23-2021 04:06 PM
Here's what my colleague and friend Julian Saba found on this topic:
Single Cell Proteomics Using Frog (Xenopus laevis) Blastomeres Isolated from Early Stage Embryos, Which Form a Geometric Progression in Protein Content (Q Exactive HF)
Liangliang Sun, Kyle M. Dubiak, Elizabeth H. Peuchen, Zhenbin Zhang, Guijie Zhu, Paul W. Huber, and Norman J. Dovichi
Anal. Chem. 2016, 88, 13, 6653β6657
https://pubs.acs.org/doi/10.1021/acs.analchem.6b01921
Single-cell mass spectrometry for discovery proteomics: quantifying translational cell heterogeneity in the 16-cell frog (Xenopus) embryo (Orbitrap Fusion)
Camille Lombard-Banek, Prof. Sally A. Moody, Prof. Peter Nemes
Angew. Chem. Int. Ed, 55 (2016), pp. 2454-2458
https://onlinelibrary.wiley.com/doi/10.1002/anie.201510411
Single Cell Proteomics by Data-Independent Acquisition To Study Embryonic Asymmetry in Xenopus laevis (Q Exactive HF-X)
Anumita Saha-Shah, Melody Esmaeili, Simone Sidoli, Hyojeong Hwang, Jing Yang, Peter S. Klein, and Benjamin A. Garcia
Anal. Chem. 2019, 91, 14, 8891β8899
https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.9b00327
Identification of Maturation-Specific Proteins by Single-Cell Proteomics of Human Oocytes (Orbitrap Velos)
IrmaVirant-Klun, Stefan Leicht, Christopher Hughes, Jeroen Krijgsveld
MCP Volume 15, Issue 8, August 2016, Pages 2616-2627
https://www.mcponline.org/article/S1535-9476(20)33492-7/full...
Microsampling Capillary Electrophoresis Mass Spectrometry Enables Single-Cell Proteomics in Complex Tissues: Developing Cell Clones in Live Xenopus laevis and Zebrafish Embryos (Q Exactive Plus)
Camille Lombard-Banek, Sally A. Moody, M. Chiara Manzini, and Peter Nemes
Anal. Chem. 2019, 91, 7, 4797β4805
https://pubs.acs.org/doi/10.1021/acs.analchem.9b00345
Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs (Orbitrap Velos)
Arne H. Smits, Rik G.H. Lindeboom, Matteo Perino, Simon J. van Heeringen, Gert Jan C. Veenstra, Michiel Vermeulen
Nucleic Acids Research, Volume 42, Issue 15, 2 September 2014, Pages 9880β9891
β08-02-2021 10:59 PM
Thanks for sharing.
β08-23-2021 04:06 PM
Here's what my colleague and friend Julian Saba found on this topic:
Single Cell Proteomics Using Frog (Xenopus laevis) Blastomeres Isolated from Early Stage Embryos, Which Form a Geometric Progression in Protein Content (Q Exactive HF)
Liangliang Sun, Kyle M. Dubiak, Elizabeth H. Peuchen, Zhenbin Zhang, Guijie Zhu, Paul W. Huber, and Norman J. Dovichi
Anal. Chem. 2016, 88, 13, 6653β6657
https://pubs.acs.org/doi/10.1021/acs.analchem.6b01921
Single-cell mass spectrometry for discovery proteomics: quantifying translational cell heterogeneity in the 16-cell frog (Xenopus) embryo (Orbitrap Fusion)
Camille Lombard-Banek, Prof. Sally A. Moody, Prof. Peter Nemes
Angew. Chem. Int. Ed, 55 (2016), pp. 2454-2458
https://onlinelibrary.wiley.com/doi/10.1002/anie.201510411
Single Cell Proteomics by Data-Independent Acquisition To Study Embryonic Asymmetry in Xenopus laevis (Q Exactive HF-X)
Anumita Saha-Shah, Melody Esmaeili, Simone Sidoli, Hyojeong Hwang, Jing Yang, Peter S. Klein, and Benjamin A. Garcia
Anal. Chem. 2019, 91, 14, 8891β8899
https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.9b00327
Identification of Maturation-Specific Proteins by Single-Cell Proteomics of Human Oocytes (Orbitrap Velos)
IrmaVirant-Klun, Stefan Leicht, Christopher Hughes, Jeroen Krijgsveld
MCP Volume 15, Issue 8, August 2016, Pages 2616-2627
https://www.mcponline.org/article/S1535-9476(20)33492-7/full...
Microsampling Capillary Electrophoresis Mass Spectrometry Enables Single-Cell Proteomics in Complex Tissues: Developing Cell Clones in Live Xenopus laevis and Zebrafish Embryos (Q Exactive Plus)
Camille Lombard-Banek, Sally A. Moody, M. Chiara Manzini, and Peter Nemes
Anal. Chem. 2019, 91, 7, 4797β4805
https://pubs.acs.org/doi/10.1021/acs.analchem.9b00345
Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs (Orbitrap Velos)
Arne H. Smits, Rik G.H. Lindeboom, Matteo Perino, Simon J. van Heeringen, Gert Jan C. Veenstra, Michiel Vermeulen
Nucleic Acids Research, Volume 42, Issue 15, 2 September 2014, Pages 9880β9891